Study: Connectome Workbench v1.5 Tutorial
Data Use Terms
WU-Minn HCP Consortium Open Access Data Use Terms
1. I will not attempt to establish the identity of or attempt to contact any of the included human subjects.
2. I understand that under no circumstances will the code that would link these data to Protected Health Information be given to me, nor will any additional information about individual human subjects be released to me under these Open Access Data Use Terms.
3. I will comply with all relevant rules and regulations imposed by my institution. This may mean that I need my research to be approved or declared exempt by a committee that oversees research on human subjects, e.g. my IRB or Ethics Committee. The released HCP data are not considered de-identified, insofar as certain combinations of HCP Restricted Data (available through a separate process) might allow identification of individuals. Different committees operate under different national, state and local laws and may interpret regulations differently, so it is important to ask about this. If needed and upon request, the HCP will provide a certificate stating that you have accepted the HCP Open Access Data Use Terms.
4. I may redistribute original WU-Minn HCP Open Access data and any derived data as long as the data are redistributed under these same Data Use Terms.
5. I will acknowledge the use of WU-Minn HCP data and data derived from WU-Minn HCP data when publicly presenting any results or algorithms that benefitted from their use.
1. Papers, book chapters, books, posters, oral presentations, and all other printed and digital presentations of results derived from HCP data should contain the following wording in the acknowledgments section: "Data were provided [in part] by the Human Connectome Project, WU-Minn Consortium (Principal Investigators: David Van Essen and Kamil Ugurbil; 1U54MH091657) funded by the 16 NIH Institutes and Centers that support the NIH Blueprint for Neuroscience Research; and by the McDonnell Center for Systems Neuroscience at Washington University."
2. Authors of publications or presentations using WU-Minn HCP data should cite relevant publications describing the methods used by the HCP to acquire and process the data. The specific publications that are appropriate to cite in any given study will depend on what HCP data were used and for what purposes. An annotated and appropriately up-to-date list of publications that may warrant consideration is available at http://www.humanconnectome.org/about/acknowledgehcp.html
3. The WU-Minn HCP Consortium as a whole should not be included as an author of publications or presentations if this authorship would be based solely on the use of WU-Minn HCP data.
6. Failure to abide by these guidelines will result in termination of my privileges to access WU-Minn HCP data.
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Files
FULL TITLE:
Connectome Workbench v1.5 Tutorial
SPECIES:
Human
DESCRIPTION:
This dataset contains HCP-generated data for completing the Connectome Workbench v1.5 Tutorial. A PDF of the tutorial instructions and data Release notes are also included. Scenes 5 & 6 for viewing functional connectivity (see below) require the user to have internet access and a ConnectomeDB account. Sign up for ConnectomeDB at https://db.humanconnectome.org/
Data included from the HCP-Young Adult 500 Subjects Release:
*individual subject (100307) and 440 subject (R440) group-average structural files (including surfaces at 32k and 164k mesh resolutions)
*maps of myelin, curvature, Freesurfer sulc and cortical thickness for 100307 and R440 (at 32k and 164k mesh resolutions)
*groupaverage tfMRI grayordinates analysis results for R440
*label, borders, and foci files generated from other studies to use for reference
Due to their large size (33 GB each), the two group-average dense functional connectome files for R468 are remotely accessed in ConnectomeDB (shown in Scenes 5 & 6) to generate connectivity maps ‘on the fly’, requiring the user to have internet access and login using their ConnectomeDB account credentials.
For those that would like a local copy of similar S1200 versions of the dense connectome files or the Group-PCA Eigenmaps (2 GB) that can be used to create them locally using wb_command, they are available for download from the WU-Minn HCP Data -- 1200 Subjects project page in ConnectomeDB: https://db.humanconnectome.org/data/projects/HCP_1200
- John Harwell
- Jennifer Elam
- David Van Essen
- Erin Reid
- Timothy Coalson
- Matthew Glasser
- Washington University in St. Louis
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WB_1.5_SCENES.164k_fs_LR.scene
SCENES: -
WB_1.5_SCENES.32k_fs_LR.scene
SCENES:- 1. Individual surfaces and volumes
- 2. Individual vs Group Avg surfaces and volumes
- 3. Individual vs Group Avg Myelin Maps on R440 Surfaces
- 4. Resting State fMRI Time Series surfaces, volume, and charting
- 5. fcMRI, Full Correlation, R468 surfaces and volume montage
- 6. fcMRI, MGT-regressed correlation, R468 surfaces and volume montage
- 7. tfMRI (2BK-0BK WM), R440, on surfaces and volume montage
- 8. Parcellated MGTR Connectivity, R196, RSN parcels: Surface and Matrix chart display
- 9. Parcellation Borders displayed with parcellation labels on R440 surfaces
- 10. Foci displayed on R440 surfaces
- Annotations
- Histogram Chart
- Lines Chart
- Dynamic Lines Chart
- Matrix Chart
- Media (Image) in Left tab
- Manual Tile Tabs Layout
- Dynamic Connectivity